flowsom.tl.get_channels

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flowsom.tl.get_channels#

flowsom.tl.get_channels(obj, markers, exact=True)#

Gets the channels of the provided markers based on a FlowSOM object or an FCS file.

Parameters:

  • obj (FlowSOM / AnnData) – A FlowSOM object or a FCS AnnData object

  • markers (ndarray) – An array of markers

  • exact (boolean) – If True, a strict search is performed. If False, regexps can be used.

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